ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000399 / PAKISTAN / 2017 / Chikungunya virus Envelope protein (E2-protein)
  ARID AR-000399  
  ARCN AR-000399  
  DBXR AWX90875.1  
  VPRO Chikungunya virus Envelope protein (E2-protein)  
  PDES Envelope protein 2  
  SORG Togaviridae; Alphavirus;    Chikungunya virus strain: Pakistan-03  
  HOST Homo sapiens  
  YRCL 2017  
  CNTR PAKISTAN  
 
  AASQ >AR-000399
PYLAHCPDCGEGHSCHSPVALERIRNEATDGTLKIQVSLQIGIKTDDSHDWTKLRYMDNHMPADAERAGL
FVRTSAPCTITGTMGHFILARCPKGETLTVGFTDSRKISHSCTHPFHHDPPVIGREKFHSRPQHGKELPC
STYVQSTAATTEEIEVHMPPDTPDRTLMSQQSGNVKITVNGQTVRYKCNCGGSNEGLTTTDKVINNCKVD
QCHAAVTNHKKWQYNSPLVPRNAELGDRKGKIHIPFPLANATCRVPKARNPTVTYGKNQVIMLLYPDHPT
LLSYRNMGEEPNYQEEWVMHKKEVVLTVPTEGLEVTWGNNEPYKYWPQLSTNGTAHGHPHEIILYYYELY
PTMTVVVVSVATFILLSMVGMAAGMCMCARRRCITPYELTPGATVPFLLSLICC
 
 
  ANSC 0.570  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 AHCPDC 0
2 GHSCHSPVALE 0
3 KIQVSLQIG 0
4 GLFVRTSAPCTI 0
5 FILARC 0
6 SHSCTHPFHHDPPVI 0
7 ELPCSTYVQST 0
8 RYKCNC 0
9 VDQCHAAVT 0
10 SPLVPRN 0
11 HIPFPL 0
12 NATCRVP 0
13 VIMLLYPDHPTLLS 0
14 KKEVVLTVPT 0
15 PHEIILYYYEL 0
16 TMTVVVVSVATFILLSMV 0
17 MCMCARR 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 250-NATC-253
2 260-NPTV-263
3 332-NGTA-335
 
  PDBX Homologous 3D in PDB : .pdb