ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000398 / PAKISTAN / 2017 / Chikungunya virus Envelope protein (E1-protein)
  ARID AR-000398  
  ARCN AR-000398  
  DBXR AWX90875.1  
  VPRO Chikungunya virus Envelope protein (E1-protein)  
  PDES Envelope protein 1  
  SORG Togaviridae; Alphavirus;    Chikungunya virus strain: Pakistan-03  
  HOST Homo sapiens  
  YRCL 2017  
  CNTR PAKISTAN  
 
  AASQ >AR-000398
RTAKAATYQEAAIYLWNEQQPLFWLQALIPLAALIVLCNCLRLLPCCCKTLAFLAVMSVGAHTVSAYEHV
TVIPNTVGVPYKTLVNRPGYSPMVLEMELLSVTLEPTLSLDYITCEYKTVIPSPYVKCCGTAECKDKNLP
DYSCKVFTGVYPFMWGGAYCFCDAENTQLSEAHVEKSESCKTEFASAYRAHTASASAKLRVLYQGNNITV
TAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGRPGQFGDIQSRTPESEDVY
ANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERGASLQHTAPFGCQIATNPVRAVNCAVGNMPISIDIPE
AAFTRVVDAPSLTDMSCEVPACTHSSDFGGVAVIKYAASKKGKCAVHSMTNAVTIREAEIEVEGNSQLQI
SFSTALASAEFRVQVCSTQVHCAAECHPPKDHIVNYPASHTTLGVQDISATAMSWVQKITGGVGLVVAVA
ALILIVVLCVSFSR
 
 
  ANSC 0.493  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 LFWLQALIPLAALIVLCNCLRLLPCCCKTLAFLAVMSV 0
2 VSAYEHVTVIPNTVGVPYKT 0
3 SLDYITC 0
4 YKTVIPSPYVKCCGTA 0
5 DYSCKVFTGV 0
6 KIVVYKG 0
7 NTQLVLQR 0
8 GTVHVPYS 0
9 TRVVDAP 0
10 EVPACT 0
11 GVAVIKY 0
12 RVQVCSTQVHCAAECH 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 207-NITV-210
 
  PDBX Homologous 3D in PDB : .pdb