ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000346 / BANGLADESH / 2017 / Chikungunya virus Envelope protein (E1-protein)
  ARID AR-000346  
  ARCN AR-000346  
  DBXR AWH12290.1  
  VPRO Chikungunya virus Envelope protein (E1-protein)  
  PDES Envelope protein 1  
  SORG Togaviridae; Alphavirus;    Chikungunya virus strain: CHIK-BD1062  
  HOST Homo sapiens  
  YRCL 2017  
  CNTR BANGLADESH  
 
  AASQ >AR-000346
YEHVTVIPNTVGVPYKTLVNRPGYSPMVLEMELLSVTLEPTLSLDYITCEYKTVIPSPYVKCCGTAECKD
KNLPDYSCKVFTGVYPFMWGGAYCFCDAENTQLSEAHVEKSESCKTEFASAYRAHTASASAKLRVLYQGN
NITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGRPGQFGDIQSRTPES
EDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERGASLQHTAPFGCQIATNPVRAVNCAVGNMPISI
DIPEAAFTRVVDAPSLTDMSCEVPACTHSSDFGGVAVIKYAASKKGKCAVHSMTNAVTIREAEIEVEGNS
QLQISFSTALASAEFRVQVCSTQVHCAAECHPPKDHIVNYPASHTTLGVQDISATAMSWVQKITGGVGLV
VAVAALILIVVLCVSFSRH
 
 
  ANSC 0.515 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 VTVIPNTVGVPYKT 0
2 SLDYITC 0
3 YKTVIPSPYVKCCGTA 0
4 DYSCKVFTGV 0
5 KIVVYKG 0
6 NTQLVLQR 0
7 GTVHVPYS 0
8 TRVVDAP 0
9 CEVPACT 0
10 GVAVIKY 0
11 RVQVCSTQVHCAAECH 0
12 LLSVTLE 0
13 AYCFCD 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 141-NITV-144
 
  PDBX Homologous 3D in PDB : .pdb