ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000304 / INDIA / 2007 / Chikungunya virus Envelope protein (E2-protein)
  ARID AR-000304  
  ARCN AR-000304  
  DBXR AEY77532.1  
  VPRO Chikungunya virus Envelope protein (E2-protein)  
  PDES Envelope protein 2  
  SORG Togaviridae; Alphavirus;    Chikungunya virus strain: IND-07-WB  
  HOST Homo sapiens  
  YRCL 2007  
  CNTR INDIA  
 
  AASQ >AR-000304
YEHVTVIPNTVGVPYKTLVNRPGYSPMVLEMELLSVTLEPTLSLDYITCEYKTVIPSPYVKCCGTAECKD
KNLPDYSCKVFTGVYPFMWGGAYCFCDAENTQLSEAHVEKSESCKTEFASAYRAHTASASAKLRVLYQGN
NITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGRPGQFGDIQSRTPES
KDVYANTQLVLQRPAVGTVHVPYSQAPSGFKYWLKERGASLQHTAPFGCQIATNPVRAVNCAVGNMPISI
DIPEAAFTRVVDAPSLTDMSCEVPACTHSSDFGGVAIIKYAASKKGKCAVHSMTNAVTIREAEIEVEGNS
QLQISFSTALASAEFRVQVCSTQVHCAAECHPPKDHIVNYPASHTTLGVQDISATAMSWVQKITGGVGLV
 
 
  ANSC 0.509 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 VTVIPNTVGVPYKT 0
2 LLSVTLE 0
3 SLDYITC 0
4 YKTVIPSPYVKCCGTA 0
5 DYSCKVFTGV 0
6 AYCFCD 0
7 KIVVYKG 0
8 NTQLVLQRP 0
9 VGTVHVPYSQ 0
10 TRVVDAP 0
11 CEVPACTHS 0
12 VAIIKY 0
13 RVQVCSTQVHCAAECH 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 141-NITV-144
 
  PDBX Homologous 3D in PDB : .pdb