ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000286 / INDIA / 2003 / Chandipura virus isolate CIN 0327, nucleocapsid protein
  ARID AR-000286  
  ARCN AR-000286  
  DBXR ADO63665.1  
  VPRO Chandipura virus isolate CIN 0327, nucleocapsid protein  
  PDES Nucleocapsid protein  
  SORG Flaviviridae; Flavivirus;    Chandipura virus strain: CIN 0327  
  HOST Homo sapiens  
  YRCL 2003  
  CNTR INDIA  
 
  AASQ >AR-000286
MSSQVFCISTGQTVSVCLPANEDPVEFPGAFFTPNARKPTVYIKKETDLSLLRSHVYDGIKDGSVTVSQI
NSYLYMVLKDIREKPDKNWTSFGVELGKKNEPMGIFDLLNVEDVKGKELDKKGQDTRLPGDDLWLPTLIF
GLYRVSRATQVEYKKTLMTNLYAQCKLRTKDAEEIVDETAEFFNAWANDSNFTKIVAAVDMYFHHFKKSD
HAPIRFGTIVSRFKDCAALSTLSHLQKVTGLPIEEVFTWVFNKSVQDDLLRMMTPGQEIDQADSYMPYLI
DMGLSTKSPYSSTKNPSFHFWGQLTAFLVKSARAKNALVPVDIAYHELTTAALLFAYAIGRSSELEQRFV
LNGKKFTKEKDSRDDNDTTPPSERNVVVWLAWWEDIKHEITPDMKAFAKRAVERVGDIRVNSVAEYARKL
FA
  
 
  ANSC  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 QVFCISTG 0
2 TVSVCLPA 0
3 PTVYIK 0
4 LSLLRSHVYDG 0
5 SVTVSQINSYLYMVLKD 0
6 FDLLNVE 0
7 LPTLIFGLYRVS 0
8 YAQCKL 0
9 TKIVAAVDMYFHHF 0
10 GTIVSRFKDCAALSTLSHLQKVTGL 0
11 TAFLVKSA 0
12 NALVPVDIAYHEL 0
13 TAALLFAYAI 0
14 RNVVVWLA 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
 
  PDBX Homologous 3D in PDB : .pdb  

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