ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000196 / INDIA / 2009 / Chikungunya virus Envelope protein (E1-protein)
  ARID AR-000196  
  ARCN AR-000196  
  DBXR ACT10817.1  
  VPRO Chikungunya virus Envelope protein (E1-protein)  
  PDES Envelope protein 1  
  SORG Togaviridae; Alphavirus;    Chikungunya virus strain: CHIK-Peddaputha02  
  HOST Homo sapiens  
  YRCL 2009  
  CNTR INDIA  
 
  AASQ >AR-000196
YEHVTVIPNTVGVPYKTLVNRPGYSPMVLEMELLSVTLEPTLSLDYITCEYKTVIPSPYVKCCGTAECKD
KNLPDYSCKVFTGVYPFMWGGAYCFCDAENTQLSEAHVEKSESCKTEFASAYRAHTASASAKLRVLYQGN
NITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGRPGQFGDIQSRTPES
KDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERGASLQHTAPFGCQIATNPVRAVNCAVGNMPISI
DIPEAAFTRVVDAPSLTDMSCEVPACTHSSDFGGVAIIKYAASKKGKCAVHSMTNAVTIREAEIEVEGNS
QLQISFSTALASAEFRVQVCSTQVHCAAECHPPKDHIVNYPASHTTLGVQDISATAMSWVQKITGGVGLV
VAVAALILIVVLCVSFSRH
 
 
  ANSC 0.514 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 VAIIKY 0
2 CEVPACT 0
3 TRVVDAP 0
4 GTVHVPYS 0
5 NTQLVLQR 0
6 KIVVYKG 0
7 DYSCKVFTGV 0
8 YKTVIPSPYVKCCGTA 0
9 SLDYITC 0
10 VTVIPNTVGVPYKT 0
11 RVQVCSTQVHCAAECH 0
12 AYCFCD 0
13 LLSVTLE 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 141-NITV-144
 
  PDBX Homologous 3D in PDB : .pdb