ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000177 / SRI LANKA / 2000 / Dengue virus 3 NS1-Protein
  ARID AR-000177  
  ARCN AR-000177  
  DBXR AAM51537  
  VPRO Dengue virus 3 NS1-Protein  
  PDES Non-structural protein  
  SORG Flaviviridae; Flavivirus;    Dengue virus 3 strain: D3/H/IMTSSA-SRI/2000/1266  
  HOST Human (Homo sapiens)  
  YRCL 2000  
  CNTR SRI LANKA  
 
  AASQ >AR-000177
GCVINWKGKELKCGSGIFVTNEVHTWTEQYKFQADSPKRLATAIAGAWENGVCGIRSTTRMENLLWKQIA
NELNYILWENNIKLTVVVGDTLGVLEQGKRTLTPQPMELKYSWKTWGKAKIVTAETQNSSFIIDGPNTPE
CPSASRAWNVWEVEDYGFGVFTTNIWLKLREVYTQLCDHRLMSAAVKDERAVHADMGYWIESQKNGSWKL
EKASLIEVKTCTWPKSHTLWTNGVLESDMIIPKSLAGPISQHNYRPGYHTQTAGPWHLGKLELDFNYCEG
TTVVITESCGTRGPSLRTTTVSGKLIHEWCCRSCTLPPLRYMGEDGCWYGMEIRPISEKEENMVKSLVSA
GSG
  
 
  ANSC 0.469 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 4-IN-5 0
2 10-ELKCGSGIFVTNE-22 0
3 31-KFQAD-35 0
4 37-PKRLATAIA-45 0
5 50-NGVCGIR-56 0
6 66-WKQ-68 0
7 72-ELNYI-76 0
8 83-KLTVVVGDTLGVLEQ-97 0
9 103-TP-104 0
10 107-MEL-109 0
11 111-YS-112 0
12 119-AKIVTA-124 0
13 130-SFII-133 0
14 139-PECPSA-144 0
15 150-VWEV-153 0
16 155-DYGFGVFTT-163 0
17 166-WLKLREVYTQLCDHR-180 0
18 182-MSAAVKDERAVHAD-195 0
19 212-KASLIEVKTCTWP-224 0
20 226-SHT-228 0
21 234-VLESD-238 0
22 240-IIPKSLAGPISQHN-253 0
23 255-RPGYHTQ-261 0
24 265-PW-266 0
25 268-LGKLELDFNYC-278 0
26 274-DFNYC-278 0
27 280-GTTVVITES-288 0
28 291-TR-292 0
29 298-TT-299 244105
30 302-SGKLIHEWCCRSCTLPPLR-320 0
31 344-VKSLVSA-350 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 128-NSS-130
2 205-NGS-207
 
  PDBX Homologous 3D in PDB : 1OAN.pdb  

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