ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000171 / INDIA / 2006 / Chikungunya virus Envelope protein (E2-protein)
  ARID AR-000171  
  ARCN AR-000171  
  DBXR ADZ47901  
  VPRO Chikungunya virus Envelope protein (E2-protein)  
  PDES Envelope protein 2  
  SORG Togaviridae; Alphavirus;    Chikungunya virus strain: IND-06-Guj  
  HOST Human (Homo sapiens)  
  YRCL 2006  
  CNTR INDIA  
 
  AASQ >AR-000171
STKDNFNVYKATRPYLAHCPDCGEGHSCHSPVALERIRNEATDGTLKIQVSLQIGIKTDDSHDWTKLRYM
DNHMPADAERAGLFVRTSAPCTITGTMGHFILARCPKGETLTVGFTDSRKISHSCTHPFHHDPPVIGREK
FHSRPQHGKELPCSTYVQSTAATTEEIEVHMPPDTPDRTLMSQQSGNVKITVNGQTVRYKCNCGGSNEGL
TTTDKVINNCKVDQCHAAVTNHKKWQYNSPLVPRNAELGDRKGKIHIPFPLANVTCRVPKARNPTVTYGK
NQVIMLLYPDHPTLLSYRNMGEEPNYQEEWVMHKKEVVLTVPTEGLEVTWGNNEPYKYWPQLSTNGTAHG
HPHEIILYYYELYPTMTVVVVSVATFILLSMVGMAAGMCMCARRRCITPYELTPGATVPFLLSLICCIRT
AKA
 
 
  ANSC 0.557 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 MCMCARR 0
2 TMTVVVVSVATFILLSM 0
3 PHEIILYYYEL 0
4 KKEVVLTV 0
5 VIMLLYPDHPTLL 0
6 HIPFPLANVTCRVP 0
7 SPLVPRN 0
8 VDQCHAAV 0
9 RYKCNC 0
10 ELPCSTYVQST 0
11 SHSCTHPFHHDPPVI 0
12 FILARC 0
13 GLFVRTSAPCT 0
14 KIQVSLQIG 0
15 SCHSPVALE 0
16 RPYLAHCPDC 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 263-NVT-265
2 345-NGT-347
 
  PDBX Homologous 3D in PDB : 1OAN.pdb