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A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000110 / INDIA / 2011 / West Nile virus NS1 protein
  ARID AR-000110  
  ARCN AR-000110  
  DBXR AGI16461  
  VPRO West Nile virus NS1 protein  
  PDES Non-structural protein  
  SORG Flaviviridae; Flavivirus;    West Nile virus strain: 1048813  
  HOST Homo sapiens  
  YRCL 2011  
  CNTR INDIA  
 
  AASQ >AR-000110
DTGCAIDISRQELRCGSGVFIHNDVEAWMDRYKYYPETPQGLAKIIQKAHKEGVCGLRSVSRLEHQMWEA
VKDELNTLLKENGVDLSVVVEKQEGMYKPAPKRLTATTEKLEIGWKAWGKSILFAPELANNTFVVDGPET
KECPTQNRAWNSLEVEDFGFGLTSTRMFLKVRESNTTECDSKIIGTAVKNNLAIHSDLSYWIESRLNDTW
KLERAVLGEVKSCTWPETHTLWGDGILESDLIIPVTLAGPRSNHNRRPGYKTQNQGPWDEGRVEIDFDYC
PGTTVTLSDSCGHRGPAIRTTTESGKLITDWCCRSCTLPPLRYQTDSGCWYGMEIRPQRHDEKTLVQSQV
NAY
  
 
  ANSC 0.504 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 4-CAIDI-8 0
2 10-RQELRCGSGVFIHND-24 0
3 33-KYYPE-37 0
4 39-PQGLAKIIQKA-49 0
5 51-KEGVCGLRSVSRL-63 0
6 72-KD-73 0
7 76-NTL-78 0
8 84-VDLSVVVEK-92 0
9 99-PAPKRL-104 0
10 120-KSILFAPE-127 0
11 131-NTFVVDG-137 0
12 152-SL-153 0
13 155-VEDF-158 0
14 168-FLKVR-172 0
15 180-DSK-182 0
16 184-IGTA-187 0
17 189-KNNLAIHSDLSYW-201 0
18 213-ERAVLGEVKSCTWP-226 0
19 238-ESDLIIPVTLAG-249 0
20 274-EIDFDYCPGTTVTLSDSCGHRGP-296 0
21 309-TDWCCRSCTLPPLRYQ-324 0
22 328-GCW-330 0
23 343-KTLVQSQV-350 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 130-NNT-132
2 175-NTT-177
3 207-NDT-209
 
  PDBX Homologous 3D in PDB : 1OAN.pdb  

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