ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000107 / INDIA / 2015 / West Nile virus Envelope protein (E-protein)
  ARID AR-000107  
  ARCN AR-000107  
  DBXR ALF46472  
  VPRO West Nile virus Envelope protein (E-protein)  
  PDES Envelope protein  
  SORG Flaviviridae; Flavivirus;    West Nile virus strain: 68856-ICDC-4  
  HOST Human (Homo sapiens)  
  YRCL 2015  
  CNTR INDIA  
 
  AASQ >AR-000107
LLVAPAYSFNCLGMSNRDFLEGVSGATWVDLVLEGDSCVTIMSKDKPTIDVKMMNMEAANLAEVRSYCYL
ATVSDLSTKAACPTMGEAHNDKRADPAFVCKQGVVDRGWGNGCGLFGKGSIDTCAKFACSTKATGRTILK
ENIKYEVAIFVHGPTTVESHGNYSTQIGATQAGRFSITPAAPSYTLKLGEYGEVTVDCEPRSGIDTNAYY
VMTVGTKTFLVHREWFMDLNLPWSSAGSTVWRNRETLMEFEEPHATKQSVIALGSQEGALHQALAGAIPV
EFSSNTVKLTSGHLKCRVKMEKLQLKG
 
 
  ANSC 0.636 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 4-APAYSFNCL-12 0
2 20-LEGV-23 0
3 25-GATWVDLVLEGDSCVTIM-42 0
4 48-TID-50 0
5 61-LAEVRSYCYLATVSDLSTKAACPTM-85 0
6 96-PAFVCKQGVVDR-107 0
7 113-CGLF-116 0
8 121-IDTCAKFACSTK-132 0
9 140-KEN-142 0
10 144-KYEVAIFVHGPTTVE-158 0
11 177-ITPAAPSYTLKLG-189 0
12 193-EVTVDCE-199 0
13 207-NAYYVMTV-214 0
14 216-TKTFLVHRE-224 0
15 231-LPWS-234 0
16 237-GST-239 0
17 256-TKQSVIALG-264 0
18 268-GALHQALAGAIPVEFSSNTVKLTSGHLKCRVKMEKLQLKG-304 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 162-NYS-164
 
  PDBX Homologous 3D in PDB : 1OAN.pdb