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 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000096 / INDIA / 2001 / Japanese encephalitis virus NS1 protein
  ARID AR-000096  
  ARCN AR-000096  
  DBXR AAC29474  
  VPRO Japanese encephalitis virus NS1 protein  
  PDES Non-structural protein  
  SORG Flaviviridae; Flavivirus;    Japanese encephalitis virus strain: Vellore P20778  
  HOST Human (Homo sapiens)  
  YRCL 2001  
  CNTR INDIA  
 
  AASQ >AR-000096
DTGCAIDITRKEMRCGSGIFVHNDVEAWVDRYKYLPETPRSLAKIVHKAHKEGVCGVRSVTRLEHQMWEA
VRDELNVLLKENAVDLSVVVNKPVGRYRSAPKRLSMTQEKFEMGWKAWGKSILFAPELANSTFVVDGPET
KECPDEHRAWNSMQIEDFGFGITSTRVWLKIREESTDECDGAIIGTAVKGHVAVHSDLSYWIESRYNDTW
KLERAVFGEIKSCTWPETHTLWGDGVEESELIIPHTIAGPKSKHNRREGYKTQNQGPWDENGIVLDFDYC
PGTKVTITEDCGKRGPSVRTTTDSGKLITDWCCRSCSLPPLRFRTENGCWYGMEIRPVRHDETTLVRSQV
DAFNGEMVDPFQLGLLVMFLATQEVLRKRWTARLTIPAVLGALLVLMLGGITYTDLARYVVL
  
 
  ANSC 0.479 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 4-CAID-7 0
2 16-GSGIFVHND-24 0
3 26-EAWVDRYKYLPETPRSLAKIVHKA-49 0
4 51-KEGVCGVRSVTRL-63 0
5 72-RDELNVLLKENAVDLSVVVNKPVGRY-97 0
6 101-PKR-103 0
7 120-KSILFAPEL-128 33348
8 131-STFVVDG-137 0
9 144-PDE-146 0
10 164-STRVWLK-170 0
11 180-DGA-182 0
12 184-IGTAVKGHVAVHSDLSYW-201 0
13 213-ERA-215 0
14 217-FGEIKSCTWP-226 0
15 238-ESELIIPHTIAGP-250 0
16 272-GIVLDFDYCPGTKVTIT-288 0
17 294-RGP-296 0
18 298-VR-299 0
19 309-TDWCCRSCSLPPLR-322 0
20 335-IRPVRH-340 0
21 343-TTLVRSQVDA-352 0
22 359-DPFQLGLLVMFLATQEVLRK-378 0
23 383-RLTIPAVLGALLVLMLGGI-401 0
24 403-YTDLARY-409 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 130-NST-132
2 207-NDT-209
 
  PDBX Homologous 3D in PDB : 1OAN.pdb  

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