ICMR - NATIONAL INSTITUTE OF VIROLOGY, PUNE

 ArVirInd 

A database of Arboviral proteins from the Indian subcontinent

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Virus / Protein Name Year of Collection Country

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   ArVirInd / AR-000053 / INDIA / 2008 / Dengue virus 1 NS1-Protein
  ARID AR-000053  
  ARCN AR-000053  
  DBXR AFN54941  
  VPRO Dengue virus 1 NS1-Protein  
  PDES Non-structural protein  
  SORG Flaviviridae; Flavivirus;    Dengue virus 1 strain: RGCB419  
  HOST Human (Homo sapiens)  
  YRCL 2008  
  CNTR INDIA  
 
  AASQ >AR-000053
TGCVINWKGRELKCGSGIFVTNEVHTWTEQYKFQADSPKRLSAAIGKAWEEGVCGIRSATRLENIMWKQI
SNELNHILLENDMKFTVVVGDANGILTQGKKMIRPQPMEHKYSWKSWGKAKIIGADTQNTTFIIDGPDTP
ECPDDQRAWNIWEVEDYGFGIFTTNIWLKLRDSYTQMCDHRLMSAAIKDSKAVHADMGYWIESEKNETWK
LARASFIEVKTCIWPRSHTLWSNGVLESEMIIPKIYGGPISQHNYRPGYFTQTAGPWHLGKLELDFNLCE
GTTVVVDEHCGNRGPSLRTTTVTGKIIHEWCCRSCTLPPLRFRGEDGCWYGMEIRPVKEKEENLVRSMVS
AGSG
  
 
  ANSC 0.514 (VaxiJen v2.0)  
 
  BEPI B-CELL EPITOPES  
    A. Kolaskar method (Kolaskar AS, et al. FEBS Lett. 1990, December)
Sr. No. B-CELL EPITOPES (KOLASKAR) Confirmed Epitope (Experimental)
1 4-VIN-6 0
2 11-ELKCGSGIFVTNE-23 0
3 32-KFQAD-36 0
4 38-PKRLSAAIG-46 0
5 51-EGVCGIR-57 0
6 75-NHILL-79 0
7 85-FTVVVGD-91 0
8 97-TQ-98 0
9 122-II-123 0
10 134-ID-135 0
11 139-TPECP-143 0
12 156-DY-157 103843
13 159-FG-160 0
14 167-WLKLRDS-173 0
15 175-TQMCDHR-181 0
16 183-MSA-185 0
17 187-IKDSKAVHAD-196 0
18 212-ARASFIEVKTCIWPRSHT-229 0
19 232-SNGVLESE-239 0
20 242-IPKIYGGPISQHN-254 0
21 256-RPG-258 0
22 260-FTQ-262 0
23 266-PW-267 0
24 269-LGKLELDFNLC-279 0
25 281-GTTVVVDEH-289 0
26 299-TT-300 244105
27 303-TGK-305 0
28 308-HEWCCRSCTLPPLR-321 0
29 334-IRPV-337 0
30 346-RSMVSA-351 0
 
  TEPI T-CELL EPITOPES  
 
  NGLC N-GLYCOSYLATION SITES  
   
Sr. No. N-GLYCOSYLATION SITES
1 129-NTT-131
2 206-NET-208
 
  PDBX Homologous 3D in PDB : 1OAN.pdb  

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